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San Diego Hotel Guide. Hotels in Mission Bay, San Diego, United States of America

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Check prices for these dates

This weekend
31 Jul - 2 Aug
Next weekend
7 Aug - 9 Aug

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Our top choices for Mission Bay hotels

Outdoor pool, open 7:00 AM to 10:00 PM, pool cabanas (surcharge)

1. San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,521 reviews)
"Great location, very clean and lots to do around the area!"
United States
Terri
The price is €286
includes taxes & fees
30 Aug - 31 Aug
San Diego Mission Bay Resort
2 outdoor pools, pool cabanas (surcharge), pool umbrellas

2. Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.4 out of 10, Very good, (1,655 reviews)
"Good place nice staff"
United States
kyle
The price is €261
includes taxes & fees
30 Aug - 31 Aug
Hyatt Regency Mission Bay Spa and Marina
5 outdoor pools, a heated pool, pool umbrellas, pool loungers

3. Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,750 reviews)
"Clean room, staff very helpful, lots of things to do"
United States
Rachel Ann
The price is €286
includes taxes & fees
23 Aug - 24 Aug
Paradise Point Resort & Spa
2 outdoor pools, a heated pool, pool loungers

4. The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,398 reviews)
"Great stay"
United States
Loretta
The price is €255
includes taxes & fees
23 Aug - 24 Aug
The Dana on Mission Bay
In-room safe, desk, laptop workspace, blackout curtains

5. Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.3 km from Mission Bay
8.8 out of 10, Excellent, (1,002 reviews)
"It was very nice and clean staff was very friendly ."
United States
Sindia
The price is €142
includes taxes & fees
16 Aug - 17 Aug
Holiday Inn Express San Diego - SeaWorld Area by IHG
Outdoor pool

6. Heritage Inn San Diego

Heritage Inn San Diego
2.0 star property
2.2 km from Mission Bay
7.2 out of 10, Good, (1,748 reviews)
"Great stay!"
United States
Ivan
The price is €68
includes taxes & fees
25 Aug - 26 Aug
Heritage Inn San Diego
Exterior

7. Hilton Garden Inn San Diego Old Town/SeaWorld Area

Hilton Garden Inn San Diego Old Town/SeaWorld Area
3.0 star property
Old Town San Diego, 3.1 km from Mission Bay
8.8 out of 10, Excellent, (1,497 reviews)
"Beautiful hotel and close to old town"
United States
Laura
The price is €120
includes taxes & fees
23 Aug - 24 Aug
Hilton Garden Inn San Diego Old Town/SeaWorld Area
Lobby

8. Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.6 km from Mission Bay
7.4 out of 10, Good, (4,135 reviews)
"It was a good stay for the price!"
United States
marissa
The price is €125
includes taxes & fees
30 Aug - 31 Aug
Wyndham Garden San Diego Near SeaWorld
Lobby sitting area

9. GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (2,273 reviews)
"Excellent stay, excellent experience"
United States
Dennis
The price is €102
includes taxes & fees
16 Aug - 17 Aug
GreenTree Inn San Diego Mission Bay
Lobby

10. Comfort Inn Sea World Area

Comfort Inn Sea World Area
3.5 star property
2.9 km from Mission Bay
8.6 out of 10, Excellent, (3,940 reviews)
"Excellent Customer Service, room was clean and located really close to the main stores. Definitely the breakfast was a plus. Will be staying here again"
United States
Othoniel
The price is €120
includes taxes & fees
23 Aug - 24 Aug
Comfort Inn Sea World Area
Studio Suite, 1 King Bed, Courtyard View | View from room

11. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
4.0 star property
2.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,163 reviews)
"Nice and safe place to stay"
United States
Dominador
The price is €147
includes taxes & fees
16 Aug - 17 Aug
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
Exterior

12. Old Town Inn

Old Town Inn
2.5 star property
3.5 km from Mission Bay
9.0 out of 10, Wonderful, (1,929 reviews)
"Well kept, great location and would definitely recommend and stay again!"
United States
Jennifer
The price is €142
includes taxes & fees
19 Aug - 20 Aug
Old Town Inn
Outdoor pool

13. Crowne Plaza San Diego - Mission Valley by IHG

Crowne Plaza San Diego - Mission Valley by IHG
3.5 star property
4 km from Mission Bay
8.4 out of 10, Very good, (1,123 reviews)
"Great property and comfortable bed with the best pillows."
United States
Tom
The price is €126
includes taxes & fees
4 Aug - 5 Aug
Crowne Plaza San Diego - Mission Valley by IHG
Outdoor pool, pool loungers

14. Best Western Plus Hacienda Hotel Old Town

Best Western Plus Hacienda Hotel Old Town
3.0 star property
Old Town San Diego, 3.7 km from Mission Bay
8.4 out of 10, Very good, (2,078 reviews)
"The included breakfast buffet was a great perk and the staff were very friendly."
United States
Allan
The price is €143
includes taxes & fees
30 Aug - 31 Aug
Best Western Plus Hacienda Hotel Old Town
Exterior

15. Hampton Inn San Diego/Mission Valley

Hampton Inn San Diego/Mission Valley
2.5 star property
4.3 km from Mission Bay
8.6 out of 10, Excellent, (1,670 reviews)
"Great hotel!"
United States
Julie
The price is €131
includes taxes & fees
30 Aug - 31 Aug
Hampton Inn San Diego/Mission Valley
Exterior

16. Courtyard by Marriott Old Town

Courtyard by Marriott Old Town
3.0 star property
Old Town San Diego, 3.9 km from Mission Bay
8.8 out of 10, Excellent, (1,000 reviews)
"Always enjoy our stay so convenient!"
United States
Carmen
The price is €150
includes taxes & fees
23 Aug - 24 Aug
Courtyard by Marriott Old Town
Studio Suite, 1 King Bed with Sofa bed, Balcony | View from room

17. Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
6 km from Mission Bay
8.4 out of 10, Very good, (3,616 reviews)
"Perfect hotel for family fun."
United States
Andre
The price is €213
includes taxes & fees
2 Aug - 3 Aug
Sheraton San Diego Resort
Exterior

18. Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG
2.5 star property
4.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,084 reviews)
"Very good hotel at the price with good choice of breakfast."
United States
Tirthankar
The price is €151
includes taxes & fees
2 Aug - 3 Aug
Holiday Inn Express San Diego Airport - Old Town by IHG
Exterior

19. The Alcala Hotel Mission Valley/Seaworld

The Alcala Hotel Mission Valley/Seaworld
2.5 star property
3.6 km from Mission Bay
8.0 out of 10, Very good, (474 reviews)
"The staff was so helpful & friendly definitely would stay there again!"
United States
Nicole
The price is €104
includes taxes & fees
30 Aug - 31 Aug
The Alcala Hotel Mission Valley/Seaworld
Free daily buffet breakfast

20. Comfort Inn San Diego Old Town

Comfort Inn San Diego Old Town
2.5 star property
Old Town San Diego, 4 km from Mission Bay
8.2 out of 10, Very good, (2,038 reviews)
"Staff was amazing, and accommodating which made the stay great!"
United States
Jessica
The price is €111
includes taxes & fees
30 Aug - 31 Aug
Comfort Inn San Diego Old Town
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Where to stay in Mission Bay

Find the best Mission Bay areas for the activities you enjoy most.
A plaza with a traditional building, benches, and a large tree.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and Port of San Diego are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

A beach with surfers and swimmers during sunset.

Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

A roller coaster under construction with scaffolding and a ticket booth in the foreground.

Mission Beach

If you're spending some time in Mission Beach, Mission Beach and Mission Bay are top sights worth seeing.

A theater marquee with ornate designs and the name "Gaslamp Quarter".

Gaslamp Quarter

San Diego’s historic heart has shed its seedy past to emerge as one of the city’s premier dining, shopping and entertainment hubs.

A beach with palm trees, a hotel, and people enjoying the sand and water.

Ocean Beach

Ocean Beach is beloved for its stunning beaches. Take some time to explore sights in the area like Ocean Beach and Dog Beach.

Top Mission Bay Hotel Reviews

Wyndham San Diego Bayside

Wyndham San Diego Bayside

10/10 Excellent
"The hotel staff were incredibly friendly, welcoming, and helpful throughout my stay. They even allowed me a complimentary late checkout after my flight was delayed, which I truly appreciated. I had a wonderful experience and will definitely stay here again in the future. I highly recommend this hotel to my friends and family."
Mohammed 2-night trip
Posted 3 hours ago
Wyndham San Diego Bayside

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun exploring San Diego's Mission Bay neighbourhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighbourhood.
What's a favourite hotel to stay in Mission Bay?
Based on our traveller data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort is a short 1-minute walk from Mission Bay, and it offers a marina and 5 outdoor pools. Other good options for your stay in the neighbourhood include The Dana on Mission Bay and Hyatt Regency Mission Bay Spa and Marina.
How many hotels should I expect to find in the Mission Bay area?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodation options to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel before the accommodation's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might be able to still cancel and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then you can use the "fully refundable" filter to view top deals in Mission Bay.
What is there to do around this San Diego neighbourhood?
Enjoy a stroll along the shore at Ski Beach, Mission and Pacific Beaches and North Cove Beach while you're in Mission Bay. You could also plan a visit to Mission Bay or The Dana On Mission Bay, BW Premier Collection while you're in the neighbourhood. Don't miss favourite places to visit in the surrounding area, such as Mission Beach, Marine Corps Recruit Depot and Hotel Circle. When you're sightseeing in San Diego, Crown Point Shores and Marina Village Conference Center are also worth a stop.