San Diego Hotel Guide - Shelter Island hotels in San Diego, United States of America.

  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

Next weekend
In two weeks

Filter by

Guest rating
Guest rating
Star rating

Our top choices for Shelter Island hotels

Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina
3.0 star property
0.4 km from Shelter Island
9.0 out of 10, Wonderful, (1,580 reviews)
"Great place.very clean great for family would definitely stay there again."
United States
Joseph
The price is €139
includes taxes & fees
8 Mar - 9 Mar
Best Western Plus Island Palms Hotel & Marina

Humphreys Half Moon Inn

Humphreys Half Moon Inn
3.5 star property
1 km from Shelter Island
9.2 out of 10, Wonderful, (2,747 reviews)
"Nice hotel "
United States
Timothy
The price is €182
includes taxes & fees
8 Feb - 9 Feb
Humphreys Half Moon Inn

Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
2.4 km from Shelter Island
9.4 out of 10, Exceptional, (1,398 reviews)
"Spacious rooms, great breakfast, clean hotel, would stay here again."
United States
Pamela
The price is €167
includes taxes & fees
22 Feb - 23 Feb
Homewood Suites by Hilton San Diego Airport/Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station
3.0 star property
2.6 km from Shelter Island
9.2 out of 10, Wonderful, (1,331 reviews)
"Our room was clean, well stocked staff was great & very comfortable bed."
United States
Benny
The price is €172
includes taxes & fees
15 Feb - 16 Feb
Courtyard by Marriott San Diego Airport/Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
2.7 km from Shelter Island
9.2 out of 10, Wonderful, (1,717 reviews)
"Great place to stay for access to the airport, staff was super!"
Canada
Alison
The price is €158
includes taxes & fees
22 Feb - 23 Feb
Hampton Inn & Suites San Diego Airport Liberty Station

Sea Harbor Hotel

Sea Harbor Hotel
2.0 star property
1.4 km from Shelter Island
8.6 out of 10, Excellent, (1,017 reviews)
"Super clean rooms and a great location "
United States
Mark
The price is €93
includes taxes & fees
8 Feb - 9 Feb
Sea Harbor Hotel

TownePlace Suites by Marriott San Diego Airport/Liberty Station

TownePlace Suites by Marriott San Diego Airport/Liberty Station
3.0 star property
2.8 km from Shelter Island
9.0 out of 10, Wonderful, (1,001 reviews)
" The hotel is very clean, and the staff are friendly and helpful"
United States
Jun
The price is €171
includes taxes & fees
16 Feb - 17 Feb
TownePlace Suites by Marriott San Diego Airport/Liberty Station

Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island
3.5 star property
2.5 km from Shelter Island
8.8 out of 10, Excellent, (1,196 reviews)
"Friendly staff, clean rooms and beautiful views. Location was great for cruise port. "
United States
Claudia
The price is €159
includes taxes & fees
16 Feb - 17 Feb
Hilton San Diego Airport/Harbor Island

The Monsaraz San Diego, Tapestry Collection by Hilton

The Monsaraz San Diego, Tapestry Collection by Hilton
3.5 star property
1.6 km from Shelter Island
8.6 out of 10, Excellent, (664 reviews)
"So cutesy, veryyy nice patio area, super nice staff. "
United States
Too
The price is €147
includes taxes & fees
28 Feb - 1 Mar
The Monsaraz San Diego, Tapestry Collection by Hilton

Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel
2.5 star property
1.7 km from Shelter Island
8.6 out of 10, Excellent, (1,710 reviews)
"Great rate for a great stay!"
Canada
James
The price is €111
includes taxes & fees
23 Feb - 24 Feb
Best Western Yacht Harbor Hotel

Kona Kai San Diego

Kona Kai San Diego
4.0 star property
0.2 km from Shelter Island
8.2 out of 10, Very good, (1,002 reviews)
"Nice staff"
United States
Erika
The price is €269
includes taxes & fees
7 Mar - 8 Mar
Kona Kai San Diego

DoubleTree by Hilton San Diego Bayside

DoubleTree by Hilton San Diego Bayside
3.0 star property
1.8 km from Shelter Island
8.2 out of 10, Very good, (1,001 reviews)
"Staff were great. Room in the front building was great. "
United States
Gretchen S
The price is €151
includes taxes & fees
16 Feb - 17 Feb
DoubleTree by Hilton San Diego Bayside

Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor
3.5 star property
1.6 km from Shelter Island
7.8 out of 10, Good, (1,289 reviews)
"Great room, clean property and courteous staff"
United States
Reginald D.
The price is €87
includes taxes & fees
8 Mar - 9 Mar
Comfort Inn San Diego Airport At The Harbor

Ramada by Wyndham San Diego Airport

Ramada by Wyndham San Diego Airport
3.0 star property
1.6 km from Shelter Island
7.4 out of 10, Good, (1,007 reviews)
"Very nice clean and friendly staff"
United States
ELIZABETH
The price is €89
includes taxes & fees
8 Feb - 9 Feb
Ramada by Wyndham San Diego Airport

Hotel Point Loma

Hotel Point Loma
2.0 star property
1.5 km from Shelter Island
7.4 out of 10, Good, (372 reviews)
"Great staff and very friendly "
United States
Nalani
Hotel Point Loma

Hotel Aqua Mar

Hotel Aqua Mar
2.0 star property
1.7 km from Shelter Island
6.4 out of 10, (1,001 reviews)
"Room and bathroom were very clean loved that had microwave refrigerator disappointed didn’t have coffee pot"
United States
Pedro
Hotel Aqua Mar

Sunrise Inn San Diego

Sunrise Inn San Diego
2.0 star property
1.2 km from Shelter Island
5.6 out of 10, (1,002 reviews)
"For the price and location this hotel is great. My go to when I’m down in San Diego and don’t want to break the bank "
United States
carmina
Sunrise Inn San Diego

Samesun Ocean Beach - Hostel

Samesun Ocean Beach - Hostel
2.0 star property
Ocean Beach, 4.3 km from Shelter Island
9.6 out of 10, Exceptional, (411 reviews)
"Clean rooms, decent staff, decent breakfast, good location"
United States
Minhaz
Samesun Ocean Beach - Hostel

Crown City Inn

Crown City Inn
2.5 star property
5.4 km from Shelter Island
9.6 out of 10, Exceptional, (675 reviews)
"wonderful, convenient, amazing staff, small but well appointed rooms. "
United States
Bruce
The price is €173
includes taxes & fees
9 Mar - 10 Mar
Crown City Inn

California Dreams Hostel - Ocean Beach

California Dreams Hostel - Ocean Beach
2.0 star property
Point Loma Heights, 3.2 km from Shelter Island
8.8 out of 10, Excellent, (206 reviews)
"The staff here are terrific and the kitchen is awesome "
United States
Jason
The price is €76
includes taxes & fees
8 Feb - 9 Feb
California Dreams Hostel - Ocean Beach
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Compare popular hotels close to Shelter Island

Property
Property class
Guest rating
Breakfast included
Pool
Spa
Pet-friendly
WiFi included
Exterior
Best Western Plus Island Palms Hotel & Marina
3.0 star property
9.0
Wonderful
1,580 reviews
View
Property grounds
Humphreys Half Moon Inn
3.5 star property
9.2
Wonderful
2,747 reviews
View
Exterior
Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
9.4
Exceptional
1,398 reviews
View
Courtyard view
Courtyard by Marriott San Diego Airport/Liberty Station
3.0 star property
9.2
Wonderful
1,331 reviews
View
Lobby
Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
9.2
Wonderful
1,717 reviews
View

Top Shelter Island Hotel Reviews

Hotels near other Shelter Island attractions

Frequently asked questions

What's the area like around Shelter Island?
Shelter Island is located in a family-friendly area of San Diego known for its beautiful island views and great live music scene. If you're looking for a convenient place to stay, take a look at the 47 hotels and other accommodation options you'll find within a mile.
What's the best place to stay near Shelter Island?
Adjacent to Shelter Island, Best Western Plus Island Palms Hotel & Marina is one of the top choices for your stay based on our traveller data, and this hotel offers a marina and 2 outdoor pools. Other good choices within a short distance include Bay Club Hotel & Marina and Humphreys Half Moon Inn.
How many hotels will I be able to find near Shelter Island?
Expedia has 47 hotels and other accommodation options within a mile from Shelter Island.
If I need to cancel the hotel reservation for my stay near Shelter Island, will I receive a refund?
Yes! Most hotel room reservations are fully refundable if cancelled before the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you booked a non-refundable reservation, you might still have the option to cancel and get a refund within 24 hours of your booking. Add dates, click "Search", then you can use the "fully refundable" filter to get the best deals near Shelter Island.
What can I see and do near Shelter Island?
You might want to spend some time browsing the exhibits at USS Midway Museum, Maritime Museum of San Diego or San Diego Air and Space Museum. Explore notable local landmarks like Hotel del Coronado, Point Loma Lighthouse and Star of India. You can check out the local talent at Humphreys Concerts by the Bay, The Rady Shell at Jacobs Park and San Diego Civic Theatre.