San Diego Hotel Guide - Shelter Island hotels in San Diego, United States of America.

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Check prices for these dates

This weekend
26 Jun - 28 Jun
Next weekend
3 Jul - 5 Jul

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Guest rating

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Star rating

Our top choices for Shelter Island hotels

Exterior

Bay Club Hotel & Marina

Bay Club Hotel & Marina
3.5 star property
0.7 km from Shelter Island
9.2 out of 10, Wonderful, (3,660 reviews)
"Loved my stay there."
United States
Teresa
The price is €187
includes taxes & fees
29 Jun - 30 Jun
Bay Club Hotel & Marina
Exterior

Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina
3.0 star property
0.4 km from Shelter Island
9.0 out of 10, Wonderful, (1,594 reviews)
"Clean room staff very helpful and friendly Enjoyed pool and bar was great"
United States
Beach To
The price is €177
includes taxes & fees
29 Jun - 30 Jun
Best Western Plus Island Palms Hotel & Marina
Property grounds

Humphreys Half Moon Inn

Humphreys Half Moon Inn
3.5 star property
1 km from Shelter Island
9.2 out of 10, Wonderful, (3,016 reviews)
"Loved my stay at Half Moon Hotel—beautiful, peaceful, and very relaxing."
United States
Fanny
The price is €248
includes taxes & fees
1 Jul - 2 Jul
Humphreys Half Moon Inn
Exterior

Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
2.4 km from Shelter Island
9.4 out of 10, Exceptional, (1,547 reviews)
"Great stay, everything was outstanding"
United States
Bill
The price is €220
includes taxes & fees
8 Jul - 9 Jul
Homewood Suites by Hilton San Diego Airport/Liberty Station
Lobby

Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
2.7 km from Shelter Island
9.2 out of 10, Wonderful, (1,715 reviews)
"Good location, clean room and nice staff. A great place to stay."
United States
Patricia
The price is €166
includes taxes & fees
30 Jun - 1 Jul
Hampton Inn & Suites San Diego Airport Liberty Station
Courtyard view

Courtyard by Marriott San Diego Airport/Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station
3.0 star property
2.6 km from Shelter Island
9.2 out of 10, Wonderful, (1,284 reviews)
"Was a lovely stay and it overlooks the water."
United States
Kara
The price is €196
includes taxes & fees
29 Jun - 30 Jun
Courtyard by Marriott San Diego Airport/Liberty Station
Front of property

The Pearl Hotel

The Pearl Hotel
4.0 star property
1.6 km from Shelter Island
8.8 out of 10, Excellent, (1,000 reviews)
"Great style, clean place, and great location."
United States
Stephen
The price is €166
includes taxes & fees
5 Jul - 6 Jul
The Pearl Hotel
Gift shop

Sea Harbor Hotel

Sea Harbor Hotel
2.0 star property
1.4 km from Shelter Island
8.6 out of 10, Excellent, (1,013 reviews)
"Great location next to a peir side brewery and seafood restaurants"
United States
Ryan
The price is €126
includes taxes & fees
29 Jun - 30 Jun
Sea Harbor Hotel
Terrace/patio

Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island
3.5 star property
2.5 km from Shelter Island
8.8 out of 10, Excellent, (1,201 reviews)
"Loved our stay it had beautiful views and easy accessibility"
United States
Crystal
The price is €165
includes taxes & fees
19 Jul - 20 Jul
Hilton San Diego Airport/Harbor Island
Lobby

TownePlace Suites by Marriott San Diego Airport/Liberty Station

TownePlace Suites by Marriott San Diego Airport/Liberty Station
3.0 star property
2.8 km from Shelter Island
9.0 out of 10, Wonderful, (1,005 reviews)
"So convenient, great staff, excellent shuttle service, clean hotel I was very impressed."
United States
Terry
The price is €196
includes taxes & fees
30 Jun - 1 Jul
TownePlace Suites by Marriott San Diego Airport/Liberty Station
Standard Room, 2 Queen Beds, Non Smoking, Microwave

Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel
2.5 star property
1.7 km from Shelter Island
8.6 out of 10, Excellent, (1,932 reviews)
"The friendly staff and delicious breakfast are wonderful."
Japan
Nakamori
The price is €162
includes taxes & fees
5 Jul - 6 Jul
Best Western Yacht Harbor Hotel
Bar (on property)

DoubleTree by Hilton San Diego Bayside

DoubleTree by Hilton San Diego Bayside
3.0 star property
1.8 km from Shelter Island
8.4 out of 10, Very good, (1,029 reviews)
"Great stay!!! Recommend. So kind and our room was incredible!"
United States
Ana Maria
The price is €136
includes taxes & fees
19 Jul - 20 Jul
DoubleTree by Hilton San Diego Bayside
View from room

The Monsaraz San Diego, Tapestry Collection by Hilton

The Monsaraz San Diego, Tapestry Collection by Hilton
3.5 star property
1.6 km from Shelter Island
8.4 out of 10, Very good, (765 reviews)
"Nice rooms, great location."
United States
Debbie
The price is €160
includes taxes & fees
29 Jun - 30 Jun
The Monsaraz San Diego, Tapestry Collection by Hilton
Water view

Kona Kai San Diego

Kona Kai San Diego
4.0 star property
0.2 km from Shelter Island
8.2 out of 10, Very good, (1,000 reviews)
"Pools were nice.. Staff was friendly and view were great!"
United States
David
The price is €334
includes taxes & fees
28 Jun - 29 Jun
Kona Kai San Diego
Terrace/patio

LYFE INN & SUITES by AGA - San Diego Airport/Point Loma

LYFE INN & SUITES by AGA - San Diego Airport/Point Loma
2.0 star property
1.2 km from Shelter Island
8.2 out of 10, Very good, (53 reviews)
"Near airport."
United States
Justin
The price is €110
includes taxes & fees
30 Jun - 1 Jul
LYFE INN & SUITES by AGA - San Diego Airport/Point Loma
Exterior

Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor
3.5 star property
1.6 km from Shelter Island
7.8 out of 10, Good, (1,549 reviews)
"harbor view n breakfast were good n friendly staff"
United States
Nercy
The price is €142
includes taxes & fees
30 Jun - 1 Jul
Comfort Inn San Diego Airport At The Harbor
Room, 1 King Bed, Non Smoking (Harbor View) | Beach/ocean view

Ramada by Wyndham San Diego Airport

Ramada by Wyndham San Diego Airport
3.0 star property
1.6 km from Shelter Island
7.6 out of 10, Good, (1,000 reviews)
"Parking was handy Staff very kind, thoughtful and helpful"
Canada
carla
The price is €130
includes taxes & fees
28 Jun - 29 Jun
Ramada by Wyndham San Diego Airport
Standard Room

Hotel Point Loma

Hotel Point Loma
2.0 star property
1.5 km from Shelter Island
7.6 out of 10, Good, (436 reviews)
"Nice stay for 2 nights. Close to coffee shops and restaurants."
United States
ERNESTO
The price is €109
includes taxes & fees
28 Jun - 29 Jun
Hotel Point Loma
Exterior detail

Hotel Aqua Mar

Hotel Aqua Mar
2.0 star property
1.7 km from Shelter Island
6.4 out of 10, (1,002 reviews)
"Dave at the front desk was very accommodating and helpful with my check in needs"
United States
Michael
The price is €96
includes taxes & fees
28 Jun - 29 Jun
Hotel Aqua Mar
Lobby sitting area

Samesun Ocean Beach - Hostel

Samesun Ocean Beach - Hostel
2.0 star property
Ocean Beach, 4.3 km from Shelter Island
9.6 out of 10, Exceptional, (520 reviews)
"Busy and fun place to stay"
United States
Samantha
The price is €72
includes taxes & fees
1 Jul - 2 Jul
Samesun Ocean Beach - Hostel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Compare popular hotels close to Shelter Island

Property
Property class
Guest rating
Breakfast included
Pool
Spa
Pet-friendly
WiFi included
Exterior
Bay Club Hotel & Marina
3.5 star property
9.2
Wonderful
3,660 reviews
View
Exterior
Best Western Plus Island Palms Hotel & Marina
3.0 star property
9.0
Wonderful
1,594 reviews
View
Property grounds
Humphreys Half Moon Inn
3.5 star property
9.2
Wonderful
3,016 reviews
View
Exterior
Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
9.4
Exceptional
1,547 reviews
View
Lobby
Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
9.2
Wonderful
1,715 reviews
View

Top Shelter Island Hotel Reviews

Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island

10/10 Excellent
"Good sized room w/ balcony. Helpful staff. Shuttle service to airport much appreciated."
Robert 1-night trip
Posted 8 hours ago
Hilton San Diego Airport/Harbor Island

Hotels near other Shelter Island attractions

Sunset Cliffs Natural Park

You can take time to visit Sunset Cliffs Natural Park during your travels to San Diego. Wander the seaside and beautiful beaches in the area.
See properties

Frequently asked questions

What's the area like around Shelter Island?
Shelter Island is located in a family-friendly area of San Diego known for its beautiful island views and great live music scene. If you're looking for a convenient place to stay, take a look at the 39 hotels and other accommodation options you'll find within a mile.
What's the best place to stay near Shelter Island?
Adjacent to Shelter Island, Best Western Plus Island Palms Hotel & Marina is one of the top choices for your stay based on our traveller data, and this hotel offers a marina and 2 outdoor pools. Other good choices within a short distance include Bay Club Hotel & Marina and Kona Kai San Diego.
How many hotels will I be able to find near Shelter Island?
Expedia has 39 hotels and other accommodation options within a mile from Shelter Island.
If I need to cancel the hotel reservation for my stay near Shelter Island, will I receive a refund?
Yes! Most hotel room reservations are fully refundable if cancelled before the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you booked a non-refundable reservation, you might still have the option to cancel and get a refund within 24 hours of your booking. Add dates, click "Search", then you can use the "fully refundable" filter to get the best deals near Shelter Island.
What can I see and do near Shelter Island?
You might want to spend some time browsing the exhibits at USS Midway Museum, Maritime Museum of San Diego or San Diego Air and Space Museum. Explore notable local landmarks like Hotel del Coronado, Point Loma Lighthouse and Star of India. You can check out the local talent at Humphreys Concerts by the Bay, The Rady Shell at Jacobs Park and San Diego Civic Theatre.