A harbor with multiple sailboats and a bridge in the background.

San Diego Hotel Guide. Hotels in Harbor Island, San Diego, United States of America

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Check prices for these dates

This weekend
31 Jul - 2 Aug
Next weekend
7 Aug - 9 Aug

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Our top choices for Harbor Island hotels

Studio Suite, 1 King Bed with Sofa bed, Balcony | View from room

1. Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
Harbor Island
8.4 out of 10, Very good, (3,612 reviews)
"Perfect hotel for family fun."
United States
Andre
The price is €193
includes taxes & fees
26 Aug - 27 Aug
Sheraton San Diego Resort
Terrace/patio

2. Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island
3.5 star property
Harbor Island
8.8 out of 10, Excellent, (1,208 reviews)
"Wonderful place to stay near the airport. This is a very comfortable hotel in a beautiful convenient location."
United States
Ingrid
The price is €182
includes taxes & fees
23 Aug - 24 Aug
Hilton San Diego Airport/Harbor Island
Lobby

3. Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
0.7 km from Harbor Island
9.2 out of 10, Wonderful, (1,706 reviews)
"Great clean hotel close to the airport. Would definitely stay again."
United States
Aimee
The price is €163
includes taxes & fees
23 Aug - 24 Aug
Hampton Inn & Suites San Diego Airport Liberty Station
Gift shop

4. Sea Harbor Hotel

Sea Harbor Hotel
2.0 star property
2.1 km from Harbor Island
8.6 out of 10, Excellent, (1,036 reviews)
"Nice smooth easy stay !"
United States
Ryan
The price is €126
includes taxes & fees
26 Aug - 27 Aug
Sea Harbor Hotel
Exterior

5. Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
1 km from Harbor Island
9.4 out of 10, Exceptional, (1,607 reviews)
"Hotel was right next to the airport which was really helpful and the hotel was really nice and clean with a good breakfast."
United States
Jason
The price is €231
includes taxes & fees
24 Aug - 25 Aug
Homewood Suites by Hilton San Diego Airport/Liberty Station
Exterior

6. Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina
3.0 star property
2.3 km from Harbor Island
9.0 out of 10, Wonderful, (1,614 reviews)
"Great Place to stay in San Diego"
United States
Mark
The price is €164
includes taxes & fees
24 Aug - 25 Aug
Best Western Plus Island Palms Hotel & Marina
Property grounds

7. Humphreys Half Moon Inn

Humphreys Half Moon Inn
3.5 star property
1.8 km from Harbor Island
9.2 out of 10, Wonderful, (3,073 reviews)
"Very nice rooms, helpful staff, and a great location."
United States
alex
The price is €234
includes taxes & fees
18 Aug - 19 Aug
Humphreys Half Moon Inn
Exterior

8. Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor
3.5 star property
2 km from Harbor Island
7.8 out of 10, Good, (1,610 reviews)
"Location are perfect and the staff are pretty nice and accommodating."
United States
John
The price is €131
includes taxes & fees
24 Aug - 25 Aug
Comfort Inn San Diego Airport At The Harbor
Exterior

9. Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG
2.5 star property
2.9 km from Harbor Island
9.2 out of 10, Wonderful, (1,082 reviews)
"Very good hotel at the price with good choice of breakfast."
United States
Tirthankar
The price is €153
includes taxes & fees
3 Aug - 4 Aug
Holiday Inn Express San Diego Airport - Old Town by IHG
Standard Room, 2 Queen Beds, Non Smoking, Microwave

10. Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel
2.5 star property
1.7 km from Harbor Island
8.4 out of 10, Very good, (1,988 reviews)
"Was a great hotel"
United States
Natalia
The price is €169
includes taxes & fees
2 Aug - 3 Aug
Best Western Yacht Harbor Hotel
Free daily buffet breakfast

11. Comfort Inn San Diego Old Town

Comfort Inn San Diego Old Town
2.5 star property
Old Town San Diego, 2.9 km from Harbor Island
8.2 out of 10, Very good, (2,038 reviews)
"Clean rooms good area very comfortable"
United States
Angelica
The price is €112
includes taxes & fees
23 Aug - 24 Aug
Comfort Inn San Diego Old Town
Exterior

12. Bay Club Hotel & Marina

Bay Club Hotel & Marina
3.5 star property
2 km from Harbor Island
9.2 out of 10, Wonderful, (3,770 reviews)
"We enjoy staying here when we visit San Diego."
United States
Sandra
The price is €190
includes taxes & fees
24 Aug - 25 Aug
Bay Club Hotel & Marina
Exterior

13. Hilton Garden Inn San Diego Old Town/SeaWorld Area

Hilton Garden Inn San Diego Old Town/SeaWorld Area
3.0 star property
Old Town San Diego, 3.7 km from Harbor Island
8.8 out of 10, Excellent, (1,493 reviews)
"Clean room and easy parking"
United States
Maribel
The price is €119
includes taxes & fees
23 Aug - 24 Aug
Hilton Garden Inn San Diego Old Town/SeaWorld Area
Exterior

14. Old Town Inn

Old Town Inn
2.5 star property
3 km from Harbor Island
9.0 out of 10, Wonderful, (1,924 reviews)
"Well kept, great location and would definitely recommend and stay again!"
United States
Jennifer
The price is €165
includes taxes & fees
25 Aug - 26 Aug
Old Town Inn
Lobby

15. Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
3.3 km from Harbor Island
7.4 out of 10, Good, (4,189 reviews)
"very good would stay again"
United States
Raygan
The price is €134
includes taxes & fees
17 Aug - 18 Aug
Wyndham Garden San Diego Near SeaWorld
Exterior

16. Courtyard by Marriott Old Town

Courtyard by Marriott Old Town
3.0 star property
Old Town San Diego, 3 km from Harbor Island
8.8 out of 10, Excellent, (1,009 reviews)
"Always enjoy our stay so convenient!"
United States
Carmen
The price is €150
includes taxes & fees
23 Aug - 24 Aug
Courtyard by Marriott Old Town
View from property

17. Fairfield Inn & Suites San Diego Old Town

Fairfield Inn & Suites San Diego Old Town
3.0 star property
Old Town San Diego, 3 km from Harbor Island
8.8 out of 10, Excellent, (1,155 reviews)
"Great hotel"
United States
Alex Fernando
The price is €141
includes taxes & fees
23 Aug - 24 Aug
Fairfield Inn & Suites San Diego Old Town
3 restaurants; breakfast, lunch and dinner served

18. Wyndham San Diego Bayside

Wyndham San Diego Bayside
4.0 star property
3.3 km from Harbor Island
8.4 out of 10, Very good, (6,259 reviews)
"Great stay"
United States
Juanita
The price is €186
includes taxes & fees
26 Aug - 27 Aug
Wyndham San Diego Bayside
Outdoor pool, pool loungers

19. Best Western Plus Hacienda Hotel Old Town

Best Western Plus Hacienda Hotel Old Town
3.0 star property
Old Town San Diego, 3.3 km from Harbor Island
8.4 out of 10, Very good, (2,089 reviews)
"The included breakfast buffet was a great perk and the staff were very friendly."
United States
Allan
The price is €145
includes taxes & fees
23 Aug - 24 Aug
Best Western Plus Hacienda Hotel Old Town
Outdoor pool

20. Heritage Inn San Diego

Heritage Inn San Diego
2.0 star property
3.7 km from Harbor Island
7.2 out of 10, Good, (1,743 reviews)
"Great stay!"
United States
Ivan
The price is €68
includes taxes & fees
25 Aug - 26 Aug
Heritage Inn San Diego
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Where to stay in Harbor Island

Find the best Harbor Island areas for the activities you enjoy most.
A plaza with a traditional building, benches, and a large tree.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and Port of San Diego are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

A beach with surfers and swimmers during sunset.

Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

A roller coaster under construction with scaffolding and a ticket booth in the foreground.

Mission Beach

If you're spending some time in Mission Beach, Mission Beach and Mission Bay are top sights worth seeing.

A theater marquee with ornate designs and the name "Gaslamp Quarter".

Gaslamp Quarter

San Diego’s historic heart has shed its seedy past to emerge as one of the city’s premier dining, shopping and entertainment hubs.

An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

Mission Bay

If you're spending some time in Mission Bay, Mission Bay and Ski Beach are top sights worth seeing.

Top Harbor Island Hotel Reviews

Gaylord Pacific Resort & Convention Center

Gaylord Pacific Resort & Convention Center

10/10 Excellent
"Loved it so much! My family and I really enjoyed our 3 day stay ! We wished we could have stayed longer!"
Evelyn 2-night trip
Posted 2 hours ago
Gaylord Pacific Resort & Convention Center

Frequently asked questions

What's it like in Harbor Island?
Harbor Island is a scenic neighbourhood known for its beautiful island views and array of dining options. Consider a visit to San Diego Bay as part of your Harbor Island travel plans.
Where is the best place to stay in Harbor Island?
Based on our traveller data, Sheraton San Diego Resort is one of the top choices for your stay in Harbor Island. This hotel is a short 1-minute walk from San Diego Bay, and it offers a marina and 3 outdoor pools.
How many hotels should I expect to find in the Harbor Island area?
Book one of Expedia's 6 hotels and other accommodation options in Harbor Island and start exploring everything San Diego has to offer.
If I need to cancel my hotel reservation in Harbor Island, will I receive a refund?
Yes, the majority of hotel reservations are fully refundable if cancelled before the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you have a reservation that's non-refundable, you may still be able to cancel and get a refund within 24 hours of your booking. Enter dates in and click on "Search", then you can use the "fully refundable" filter to view the top deals on offer in Harbor Island.
What is there to do around this San Diego neighbourhood?
San Diego Bay is an attraction you might want to check out while you're in Harbor Island. While you're out sightseeing in San Diego, make sure that you visit other sights such as Marine Corps Recruit Depot or USS Midway Museum.